Function reference • optimalppp

Summary Summary of the package
`optimalppp`	optimalppp
Data Data sets distributed with the package
`sim_project_data` `sim_action_data` `sim_species_data` `sim_tree`	Simulated data
Expected phylogenetic diversity Functions for generating solutions with phylogenetic data
`ppp_exact_phylo_solution()`	Prioritize conservation projects by maximizing expected phylogenetic diversity with exact algorithms
`ppp_heuristic_phylo_solution()`	Prioritize conservation projects by maximizing expected phylogenetic diversity with heuristic algorithms
`ppp_manual_phylo_solution()`	Manually prioritize conservation projects under expected phylogenetic diversity
`ppp_random_phylo_solution()`	Randomly prioritize conservation projects under expected phylogenetic diversity
Expected weighted species richness Functions for generating solutions with species weight data
`ppp_exact_spp_solution()`	Prioritize conservation projects by maximizing expected weighted species richness using exact algorithms
`ppp_heuristic_spp_solution()`	Prioritize conservation projects by maximizing expected weighted species richness using heuristic algorithms
`ppp_manual_spp_solution()`	Manually prioritize conservation projects under expected weighted species richness
`ppp_random_spp_solution()`	Randomly prioritize conservation projects under expected weighted species richness
Visualization Functions for visualizing solutions
`ppp_plot_phylo_solution()`	Plot a 'Project Prioritization Protocol' solution with phylogenetic data
`ppp_plot_spp_solution()`	Plot a 'Project Prioritization Protocol' solution with species-level data
Miscellaneous Miscellaneous functions
`branch_matrix()`	Branch matrix
`ppp_simulate_data()`	Simulate conservation project data
`star_phylogeny()`	Star phylogeny

Reference

Summary

Data

Expected phylogenetic diversity

Expected weighted species richness

Visualization

Miscellaneous

Contents