Chapter 9 Session information
# print session information
sessionInfo()## R version 4.2.3 (2023-03-15)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04.6 LTS
##
## Matrix products: default
## BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
##
## locale:
## [1] LC_CTYPE=C.UTF-8 LC_NUMERIC=C LC_TIME=C.UTF-8
## [4] LC_COLLATE=C.UTF-8 LC_MONETARY=C.UTF-8 LC_MESSAGES=C.UTF-8
## [7] LC_PAPER=C.UTF-8 LC_NAME=C LC_ADDRESS=C
## [10] LC_TELEPHONE=C LC_MEASUREMENT=C.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] stats graphics grDevices utils datasets methods base
##
## other attached packages:
## [1] scales_1.2.1 units_0.8-1 mapview_2.11.0 highs_0.1-6
## [5] sf_1.0-12 terra_1.7-23 lubridate_1.9.2 forcats_1.0.0
## [9] stringr_1.5.0 dplyr_1.1.1 purrr_1.0.1 readr_2.1.4
## [13] tidyr_1.3.0 tibble_3.2.1 ggplot2_3.4.2 tidyverse_2.0.0
## [17] prioritizr_8.0.0
##
## loaded via a namespace (and not attached):
## [1] sass_0.4.5 jsonlite_1.8.4 bslib_0.4.2
## [4] assertthat_0.2.1 stats4_4.2.3 sp_1.6-0
## [7] highr_0.10 yaml_2.3.7 pillar_1.9.0
## [10] backports_1.4.1 lattice_0.20-45 glue_1.6.2
## [13] exactextractr_0.9.1 uuid_1.1-0 digest_0.6.31
## [16] checkmate_2.1.0 leaflet.providers_1.9.0 colorspace_2.1-0
## [19] htmltools_0.5.5 Matrix_1.5-3 pkgconfig_2.0.3
## [22] raster_3.6-20 bookdown_0.33.2 webshot_0.5.4
## [25] svglite_2.1.1 brew_1.0-8 satellite_1.0.4
## [28] tzdb_0.3.0 timechange_0.2.0 proxy_0.4-27
## [31] farver_2.1.1 generics_0.1.3 ellipsis_0.3.2
## [34] cachem_1.0.7 withr_2.5.0 cli_3.6.1
## [37] magrittr_2.0.3 evaluate_0.20 fansi_1.0.4
## [40] nlme_3.1-162 class_7.3-21 tools_4.2.3
## [43] hms_1.1.3 lifecycle_1.0.3 munsell_0.5.0
## [46] compiler_4.2.3 jquerylib_0.1.4 e1071_1.7-13
## [49] systemfonts_1.0.4 rlang_1.1.0 leafpop_0.1.0
## [52] classInt_0.4-9 grid_4.2.3 rstudioapi_0.14
## [55] htmlwidgets_1.6.2 crosstalk_1.2.0 leafem_0.2.0
## [58] base64enc_0.1-3 rmarkdown_2.21 gtable_0.3.3
## [61] codetools_0.2-19 DBI_1.1.3 R6_2.5.1
## [64] rgdal_1.6-5 knitr_1.42 fastmap_1.1.1
## [67] utf8_1.2.3 KernSmooth_2.23-20 ape_5.7-1
## [70] stringi_1.7.12 parallel_4.2.3 Rcpp_1.0.10
## [73] vctrs_0.6.1 png_0.1-8 leaflet_2.1.2
## [76] tidyselect_1.2.0 xfun_0.38
Ardron, J.A., Possingham, H.P. & Klein, C.J. (2010). Marxan Good Practices Handbook , (2nd version)n. Pacific Marine Analysis; Research Association, Victoria, BC, Canada.
Beger, M., Linke, S., Watts, M., Game, E., Treml, E., Ball, I. & Possingham, H.P. (2010). Incorporating asymmetric connectivity into spatial decision making for conservation. Conservation Letters, 3, 359–368.
Beyer, H.L., Dujardin, Y., Watts, M.E. & Possingham, H.P. (2016). Solving conservation planning problems with integer linear programming. Ecological Modelling, 328, 14–22.
Butchart, S.H.M., Clarke, M., Smith, R.J., Sykes, R.E., Scharlemann, J.P.W., Harfoot, M., Buchanan, G.M., Angulo, A., Balmford, A., Bertzky, B., Brooks, T.M., Carpenter, K.E., Comeros-Raynal, M.T., Cornell, J., Ficetola, G.F., Fishpool, L.D.C., Fuller, R.A., Geldmann, J., Harwell, H., Hilton-Taylor, C., Hoffmann, M., Joolia, A., Joppa, L., Kingston, N., May, I., Milam, A., Polidoro, B., Ralph, G., Richman, N., Rondinini, C., Segan, D.B., Skolnik, B., Spalding, M.D., Stuart, S.N., Symes, A., Taylor, J., Visconti, P., Watson, J.E.M., Wood, L. & Burgess, N.D. (2015). Shortfalls and solutions for meeting national and global conservation area targets. Conservation Letters, 8, 329–337.
Cabeza, M. & Moilanen, A. (2006). Replacement cost: A practical measure of site value for cost-effective reserve planning. Biological Conservation, 132, 336–342.
Ferrier, S., Pressey, R.L. & Barrett, T.W. (2000). A new predictor of the irreplaceability of areas for achieving a conservation goal, its application to real-world planning, and a research agenda for further refinement. Biological Conservation, 93, 303–325.
Friedrichs, M., Hermoso, V., Bremerich, V. & Langhans, S.D. (2018). Evaluation of habitat protection under the european natura 2000 conservation network the example for germany (B.-S. Yue, Ed.). PLOS ONE, 13, e0208264.
Fuller, R.A., McDonald-Madden, E., Wilson, K.A., Carwardine, J., Grantham, H.S., Watson, J.E., Klein, C.J., Green, D.C. & Possingham, H.P. (2010). Replacing underperforming protected areas achieves better conservation outcomes. Nature, 466, 365.
Hanson, J.O., Vincent, J., Schuster, R., Fahrig, L., Brennan, A., Martin, A.E., Hughes, J.S., Pither, R. & Bennett, J.R. (2022). A comparison of approaches for including connectivity in systematic conservation planning. Journal of Applied Ecology, 59, 2507–2519.
Jung, M., Arnell, A., Lamo, X. de, Garcı́a-Rangel, S., Lewis, M., Mark, J., Merow, C., Miles, L., Ondo, I., Pironon, S., Ravilious, C., Rivers, M., Schepaschenko, D., Tallowin, O., Soesbergen, A. van, Govaerts, R., Boyle, B.L., Enquist, B.J., Feng, X., Gallagher, R., Maitner, B., Meiri, S., Mulligan, M., Ofer, G., Roll, U., Hanson, J.O., Jetz, W., Marco, M.D., McGowan, J., Rinnan, D.S., Sachs, J.D., Lesiv, M., Adams, V.M., Andrew, S.C., Burger, J.R., Hannah, L., Marquet, P.A., McCarthy, J.K., Morueta-Holme, N., Newman, E.A., Park, D.S., Roehrdanz, P.R., Svenning, J.-C., Violle, C., Wieringa, J.J., Wynne, G., Fritz, S., Strassburg, B.B.N., Obersteiner, M., Kapos, V., Burgess, N., Schmidt-Traub, G. & Visconti, P. (2021). Areas of global importance for conserving terrestrial biodiversity, carbon and water. Nature Ecology and Evolution, 5, 1499–1509.
Margules, C.R. & Pressey, R.L. (2000). Systematic conservation planning. Nature, 405, 243–253.
Moilanen, A., Franco, A.M.A., Early, R.I., Fox, R., Wintle, B. & Thomas, C.D. (2005). Prioritizing multiple-use landscapes for conservation: Methods for large multi-species planning problems. Proceedings of the Royal Society B: Biological Sciences, 272, 1885–1891.
Pressey, R.L. (1999). Applications of irreplaceability analysis to planning and management problems. Parks, 9, 42–51.
Rodrigues, A.S.L., Akçakaya, H.R., Andelman, S.J., Bakarr, M.I., Boitani, L., Brooks, T.M., Chanson, J.S., Fishpool, L.D.C., Da Fonseca, G.A.B., Gaston, K.J., Hoffmann, M., Marquet, P.A., Pilgrim, J.D., Pressey, R.L., Schipper, J., Sechrest, W., Stuart, S.N., Underhill, L.G., Waller, R.W., Watts, M.E.J. & Yan, X. (2004). Global gap analysis: Priority regions for expanding the global protected-area network. BioScience, 54, 1092–1100.
Rodrigues, A.S., Cerdeira, J.O. & Gaston, K.J. (2008). Flexibility, efficiency, and accountability: Adapting reserve selection algorithms to more complex conservation problems. Ecography, 23, 565–574.
Taylor, C., Cadenhead, N., Lindenmayer, D.B. & Wintle, B.A. (2017). Improving the design of a conservation reserve for a critically endangered species (D. Russo, Ed.). PLOS ONE, 12, e0169629.